Mgr. Aleš Křenek, Ph.D.

2024

• Analysis of metadynamics simulations by metadynminer.py

  BERANEK Jan KŘENEK Aleš SPIWOK Vojtěch

  Article in Periodical

  Bioinformatics, year: 2024, volume: 40, edition: 10, DOI

• Beyond Metadata: Leveraging Similarity Search in Molecular Dynamics Data

  ROŠINEC Adrián PAVLÍK Tomáš SLANINÁKOVÁ Terézia KŘENEK Aleš ŠPRINGEROVÁ Pavlína ANTOL Matej SVOBODOVÁ Radka

  Conference abstract

  Year: 2024, type: Conference abstract

• Fast, structure-based searching in a large-scale protein data repository

  SLANINÁKOVÁ Terézia GREŠOVÁ Katarína PROCHÁZKA David SPIŠAKOVÁ Viktória ROŠINEC Adrián ČILLÍK Jakub ŠPRINGEROVÁ Pavlína KŘENEK Aleš DOHNAL Vlastislav SVOBODOVÁ Radka ANTOL Matej

  Conference abstract

  Year: 2024, type: Conference abstract

• Quantum Chemistry-Based Prediction of Electron Ionization Mass Spectra for Environmental Chemicals

  HECHT Helge ROJAS VERASTEGUI Wudmir Yudy AHMAD Zargham KŘENEK Aleš KLÁNOVÁ Jana PRICE Elliott James

  Article in Periodical

  Analytical chemistry, year: 2024, volume: 96, edition: 33, DOI

• Scientific Dataset Management System for the Research Institute Based on Onedata

  SVOBODA Tomáš ROŠINEC Adrián RAČEK Tomáš HANDL Josef KŘENEK Aleš SVOBODOVÁ Radka

  Conference abstract

  Year: 2024, type: Conference abstract

2023

• A survey of the European Open Science Cloud services for expanding the capacity and capabilities of multidisciplinary scientific applications

  CALATRAVA Amanda ASOREY Hernán ASTALOS Jan AZEVEDO Alberto BENINCASA Francesco BLANQUER Ignacio BOBAK Martin BRASILEIRO Francisco CODÓ Laia CANO Laura del ESTEBAN Borja FERRET Meritxell HANDL Josef KERZENMACHER Tobias KOZLOV Valentin KŘENEK Aleš MARTINS Ricardo PAVESIO Manuel RUBIO-MONTERO Antonio Juan SÁNCHEZ-FERRERO Juan

  Article in Periodical

  COMPUTER SCIENCE REVIEW, year: 2023, volume: 49, edition: August, DOI

• Cloudification of scientific experimental data using Onedata

  SVOBODA Tomáš KŘENEK Aleš OPIOŁA Łukasz MANZI Andrea HANDL Josef

  Conference abstract

  Year: 2023, type: Conference abstract

• Enhancing Data Accessibility: Strategies and Tools for Effective Metadata Management

  ROŠINEC Adrián SVOBODA Tomáš RAČEK Tomáš KŘENEK Aleš SVOBODOVÁ Radka

  Appeared in Conference without Proceedings

  Year: 2023, type: Appeared in Conference without Proceedings

• Introduction to Onedata at CEITEC MU and in Czech National Repository Platform

  SVOBODA Tomáš SVOBODOVÁ Radka ANTOŠ David ROŠINEC Adrián KŘENEK Aleš

  Appeared in Conference without Proceedings

  Year: 2023, type: Appeared in Conference without Proceedings

• Onedata4Sci: Life-science experimental datasets management system

  ROŠINEC Adrián SVOBODA Tomáš RAČEK Tomáš HANDL Josef SABO Jozef KŘENEK Aleš SVOBODOVÁ Radka

  Conference abstract

  Year: 2023, type: Conference abstract